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Deborah
Nelson, PhD
Professor
Department of Neurobiology, Pharmacology and
Physiology
The University of Chicago
947 E. 58th St., MC0926
Chicago, IL 60637
Email: dnelson@delphi.bsd.uchicago.edu
Phone: (773) 702- 0126
Fax: (773) 702-1216
Office: Abbott 506A (MC 0926)
Nelson
Lab web site
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Research Summary
Function of ion channels in excitation-secretion coupling.
Research Description
Research in the laboratory over the past ten years
has further explored ion channel-mediated signal transduction
in non-excitable cells focusing on regulation via intracellular
protein-protein interactions. Using recent examples
of studies conducted in the laboratory, these interactions
can subserve vastly different cellular functions which
may gate or open a channel as in the case of the G protein
coupled K channel (GIRK or Kir 3.X) (1) or the CaMKII-activated
chloride channel (2,3). Protein-protein interactions
may modulate the time a channel spends in the open state
as with the interaction of members of the SNARE protein
family with the CFTR (Cystic Fibrosis Transport Regulator)
chloride channel (4-6). Conversely, a complex
of regulatory proteins may play a concerted role in
inhibiting channel open time as is the case with annexin
IV and CaMKII in the regulation of the CaMKII �activated
chloride channel (7,8). And finally, ion channels
may be held together in regulatory networks or membrane
rafts via interactions with the actin cytoskeleton (9).
We have used as our target proteins both K and Cl channels
and have studied protein mediated channel regulation
in both classes of proteins recognized as mediators
of membrane potential stabilization.
CFTR chloride channel modulation by vesicle
trafficking proteins
Accumulating evidence suggests that many ion
channels reside within a multiprotein complex that contains
kinases and other signaling molecules. CFTRis
an example of such a channel. CFTR is activated
by cAMP dependent kinase when two nucleotide binding
domains are bound with ATP. Over the past few
years, my laboratory has collaborated with the laboratory
of Dr. Kevin Kirk at the University of Alabama at Birmingham
to explore protein-protein interactions between CFTR
and vesicle trafficking proteins of the class used to
control neurotransmitter release in neuroendocrine cells.
We have established that three of these proteins, namely
syntaxin, munc-18 and SNAP 23 all interact to modulate
channel open time. The interaction of syntaxin
is highly specific, recognizing a segment of some 20
amino acids in the N-terminal domain of CFTR to inhibit
channel opening. The binding of munc-18 and SNAP
23 regulate the affinity of the binding interaction
between syntaxin and CFTR and, thereby, channel open
time. We have established that the interaction
is stoichiometric and involves direct protein-protein
interactions rather than changes in protein trafficking.
This paradigm of membrane trafficking proteins, syntaxin
1A, SNAP 23 and munc 18, regulating the activity of
the proteins which are at the cell surface has been
subsequently shown for a number of channel and transport
proteins and our studies provided the first evidence
that such a interaction exists and that the interaction
is direct.
Chloride channel biology
The activation of chloride channels subserves
a multiplicity of cellular functions including membrane
potential stabilization, volume regulation, salt and
water balance, and intracellular vesicle acidification.
Recent work in the laboratory has focused on the cloning,
expression, and regulation of one of the most important
of the voltage dependent chloride channels, ClC-3.
While broad expression and physiological importance
of ClC-3 has been established, the mechanism of channel
activation has remained elusive. In a recent study,
my laboratory has characterized the activation pathway
for ClC-3 when it is expressed in the plasma membrane
and has shown its gating to be dependent upon phosphorylation
by the multifunctional, calcium/calmodulin dependent
kinase, CaMKII. In earlier studies on the endogenous
channel expressed in cell lines derived from the gastrointestinal
system we were able to show that the channel was regulated
by inositol phosphates and the calcium/phospholipid
dependent protein annexin IV (2,7). On-going studies
are directed at the determination of channel oligomeric
structure in the plasma membrane as well as cytoplasmic
compartments and preliminary data suggests that the
channel can function in two oligomeric states dependent
upon the site of expression. If this turns out
to be the case, then ClC-3 will be the only channel
that is capable of functional expression in two different
oligomeric forms. Recent studies in the laboratory
also demonstrate that regulation of ClC-3 involves a
cytoskeletal scaffolding that localizes the activating
kinase in close proximity to its target channel domain.
Macrophage function:secretion and particle
uptake
The final component of the research agenda within
the laboratory focuses on the regulation of particle
uptake and secretion in the macrophage bactericidal
response. Our recent studies have determined that
unlike the neuroendocrine cell, secretion in the macrophage
is highly dependent upon activated G proteins (10).
Calcium plays only a modulatory role, enhancing the
gain on secretion presumably by mobilizing vesicles
from a ready reserve pool. This model for secretion
is vastly different from that present in cells of neuroendocrine
origin where secretion is determined in toto by a calcium
dependent mechanism. The ability to selectively
mobilize membrane bound granule/vesicle proteins into
the external environment is central to the role of the
macrophage in the inflammatory response. Surface
receptor ligation by invading microorganisms initiates
the immune response via the formation of a plasma membrane
bound phagosome. The content of the phagosome
is determined primarily by the contents of the cytoplasmic
granules that discharge into it immediately following
particle ingestion. The cellular fate of the fully
mature phagosome, a subset of the intracellular vesicle
population present in the macrophage, had not been determined
until the publication of our recent study demonstrating
quantal release of free radicals which accompanies phagosomal
recycling to plasma membrane sites (11).
Future investigations and directions
Studies on-going in the laboratory are directed
at the subcellular localization of the regulatory proteins
involved in the activation of the chloride channel ClC-3.
In parallel, we are continuing our productive collaboration
with Dr. Kevin Kirk at the University of Alabama at
Birmingham further exploring protein-protein interactions
in the regulation of CFTR. We have extended our
studies to including a mutational analyis of the binding
partners within the SNARE complex in epithelial cells
and CFTR in an attempt to augment the channel trafficking
defect that is present in the disease of cystic fibrosis.
We are also involved in an active collaborative relationship
with Dr. Clive Palfrey here at the University where
we are exploring the involvement of the GTP-ase, dynamin
in the regulation of both particle uptake and phagosomal
recycling in the activated macrophage. Finally,
we are exploring the mechanism of channel gating in
the G protein activated K channel K. It is our
hypothesis that the C terminal domains of the multisubunit
structure interact to form a binding pocket stabilizing
activation by the heterotrimeric G protein subunits
Gbg.
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